This is the complete list of members for
ms_spectral_lib_file, including all inherited members.
| appendErrors(const ms_errors &src) | ms_errors | |
| clearAllErrors() | ms_errors | |
| copyFrom(const ms_errors *right) | ms_errors | |
| findEntries(const char *sequence, const char *checksum=0, const char *accession=0, const char *mods=0) const | ms_spectral_lib_file | |
| getAccessionFromNumber(const int number) const | ms_spectral_lib_file | |
| getAllMods() const | ms_spectral_lib_file | |
| getChecksumFromNumber(const int number) const | ms_spectral_lib_file | |
| getEntryFromNumber(const int number) const | ms_spectral_lib_file | |
| getEntryFromNumberAsText(const int number) const | ms_spectral_lib_file | |
| getErrorHandler() const | ms_errors | |
| getFileName() const | ms_spectral_lib_file | |
| getFormat() const | ms_spectral_lib_file | |
| getLastError() const | ms_errors | |
| getLastErrorString() const | ms_errors | |
| getModsFromNumber(const int number) const | ms_spectral_lib_file | |
| getNumEntries() const | ms_spectral_lib_file | |
| getNumResidues() const | ms_spectral_lib_file | |
| getPrecursorChargeFromNumber(const int number) const | ms_spectral_lib_file | |
| getPrecursorMZFromNumber(const int number) const | ms_spectral_lib_file | |
| getQmatch(double minMz, double maxMz) const | ms_spectral_lib_file | |
| getSequenceFromNumber(const int number) const | ms_spectral_lib_file | |
| getStatsInformation() const | ms_spectral_lib_file | |
| isValid() const | ms_errors | |
| ms_errors() | ms_errors | |
| ms_spectral_lib_file(const char *fileName, const char *regexForAccession, const char *cdbFileName=0) | ms_spectral_lib_file | |
| ms_spectral_lib_file(const char *fileName, const char *regexForAccession, const char *cdbFileName, const std::map< std::string, std::string > &modificationAliases) | ms_spectral_lib_file | |
| saveAs(const char *fileName, const bool replaceProteinName=true, ms_spectral_lib::FILE_FORMAT fileFormat=ms_spectral_lib::FORMAT_NIST_MSP, const int startNumber=1, const int endNumber=-1, const ms_spectral_lib_entry::WHAT_TO_ANNOTATE whatToAnnotate=ms_spectral_lib_entry::ANNOTATE_REPLACE_QUESTION_MARKS, const double annotateTol=0.6, const char *annotateTolu="Da", const ms_umod_configfile *unimod=0) const | ms_spectral_lib_file | |
| verifyThatModsAreInUnimod(const ms_umod_configfile &unimod) | ms_spectral_lib_file | |
| ~ms_errors() | ms_errors | |
| ~ms_spectral_lib_file() | ms_spectral_lib_file | |
