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identityMatrix() :
ms_matrix
includeProteinPeptideRatioKeys() :
ms_ms2quantitation
inErrorTolerant() :
ms_umod_specificity
,
ms_modification
initGroupChargeStates() :
ms_ms1quantitation
initialiseBaseSettings() :
ms_quantitation
inLongList() :
ms_umod_specificity
,
ms_modification
inShortList() :
ms_modification
,
ms_umod_specificity
isAbortSet() :
ms_http_helper_progress
isAccountEnabled() :
ms_user
isActive() :
ms_databaseoptions
isAllChargeStates() :
ms_quant_integration
,
ms_quant_precursor
isAllowElutionShift() :
ms_quant_integration
,
ms_quant_precursor
isAllowMassTimeMatch() :
ms_quant_precursor
isApproved() :
ms_umod_modification
isASimilarProtein() :
ms_protein
isAutoSelectCharge() :
ms_mascotoptions
isAvailable() :
ms_parserule
isAverageProtocol() :
ms_ms1quantitation
isBackboneSeries() :
ms_fragmentationrules
isBreaking() :
ms_progress_info
isCharged2Plus() :
ms_fragmentationrules
isCharged3Plus() :
ms_fragmentationrules
isComplete() :
ms_http_helper_progress
isComponentIdentified() :
ms_ms1quant_match_component
isConcatRefFileLines() :
ms_taxonomyrules
isConstrainSearch() :
ms_quant_method
isCreating() :
ms_tinycdb
isCronEnabled() :
ms_cronoptions
isCTerminal() :
ms_fragment
isDatabaseTypeAvailable() :
ms_mascotresfile
isDataCached() :
ms_peptidesummary
,
ms_ms1quantitation
isDayOfMonth() :
ms_cronjob
isDayOfWeek() :
ms_cronjob
isDBLevelTaxId() :
ms_taxonomyrules
isDefaultTargetFDRPercentage() :
ms_mascotoptions
isDirectory() :
ms_fileutilities
isEmailErrorsEnabled() :
ms_mascotoptions
isEmailUsersEnabled() :
ms_mascotoptions
isEmPAIallowed() :
ms_mascotresults
isEnabled() :
ms_clusterparams
,
ms_cronjob
,
ms_taxonomyrules
isErrorTolerant() :
ms_mascotresfile
isExcluded() :
ms_peptide_quant_ratio
isExcludeInternalLabel() :
ms_quant_multiplex
isExcludeIsobaricFragments() :
ms_quant_multiplex
isFastaPermitted() :
ms_session
,
ms_security_tasks
isFileWritable() :
ms_fileutilities
isFlag() :
ms_quant_neutralloss
,
ms_umod_neutralloss
isForkForUnixApache() :
ms_mascotoptions
isFromAlpha() :
ms_fragment
isFromBeta() :
ms_fragment
isFromRefFile() :
ms_taxonomyrules
isFromSubstitutions() :
ms_modfile
isGeneratedMonoLinker() :
ms_modification
isHidden() :
ms_modification
,
ms_umod_specificity
isHitRatioExcluded() :
ms_ms1quant_match
isHitRatioOutlier() :
ms_ms1quant_match
isHitRatioUsedForAverage() :
ms_ms1quant_match
isHour() :
ms_cronjob
isImmonium() :
ms_fragment
isIncluded() :
ms_ms1quant_match_ratio
isIncludedIn() :
ms_taxonomytree
isIndependent() :
ms_enzyme
isInfinite() :
ms_peptide_quant_ratio
isInIgnoreDupeAccessionList() :
ms_mascotoptions
isInternal() :
ms_fragment
isIsolatedPrecursor() :
ms_quant_quality
isIteratePMFIntensities() :
ms_mascotoptions
isLabelAll() :
ms_mascotoptions
isLicenseValid() :
ms_license
isLocalRefFile() :
ms_databaseoptions
isLockMemory() :
ms_databaseoptions
isLogicalCPUAvailableForMascot() :
ms_processors
isLogNormal() :
ms_protein_quant_ratio
isLoopLinker() :
ms_modification
isMatchedToCalculatedPeak() :
ms_spectral_lib_peak
isMatchOppositeCrosslinkPairs() :
ms_mascotoptions
isMemoryMapFiles() :
ms_databaseoptions
isMethodCompatible() :
ms_quant_method
isMinute() :
ms_cronjob
isMissing() :
ms_peptide_quant_ratio
,
ms_protein_quant_ratio
isMitochondrialTranslation() :
ms_taxonomyrules
isMonthOfYear() :
ms_cronjob
isMoveOldDbToOldDir() :
ms_mascotoptions
isMSMS() :
ms_mascotresfile
isNA() :
ms_mascotresults
isNeutralLossSeries() :
ms_fragmentationrules
isNil() :
ms_peptide_quant_key
isNoneFound() :
ms_enzymefile
isNTerminal() :
ms_fragment
isOk() :
ms_http_helper_return
isOpenForReading() :
ms_tinycdb
isPeptideComponentMatch() :
ms_peptidesummary
isPeptideModificationMatch() :
ms_peptidesummary
isPeptideQualityOK() :
ms_quant_helper
isPeptideQuantifiable() :
ms_quant_helper
isPeptideRatioExcluded() :
ms_customquantitation
,
ms_ms2quantitation
,
ms_quantitation
isPeptideUnique() :
ms_peptidesummary
,
ms_proteinsummary
,
ms_mascotresults
isPercolator() :
ms_mascotoptions
isPercolatorUseProteins() :
ms_mascotoptions
isPercolatorUseRT() :
ms_mascotoptions
isPermitted() :
ms_security_tasks
,
ms_session
,
ms_security_task
isPermitted_double() :
ms_session
,
ms_security_task
,
ms_security_tasks
isPermitted_long() :
ms_session
,
ms_security_task
,
ms_security_tasks
isPermitted_string() :
ms_security_tasks
,
ms_security_task
,
ms_session
isPMF() :
ms_mascotresfile
isPMFMixture() :
ms_protein
isPmfQueryUsed() :
ms_proteinsummary
isPossibleToCreate() :
ms_tinycdb
isPrecursorNL() :
ms_fragment
isPrimaryLogicalProcessor() :
ms_processors
isPrivacyEnabled() :
ms_umod_modification
isPrivate() :
ms_umod_modification
isProcessAffinitySupported() :
ms_processors
isReferenceUserSelected() :
ms_ms1quant_average_results
isRegular() :
ms_fragment
isRemoveOldIndexFiles() :
ms_mascotoptions
isReportDetail() :
ms_quant_method
isRequireBoldRed() :
ms_quant_method
,
ms_mascotoptions
isRequired() :
ms_quant_modgroup
,
ms_quant_pepneutralloss
isResidueModified() :
ms_masses
,
ms_modification
isSame() :
ms_masses
isSameAs() :
ms_umod_xref
,
ms_umod_modification
,
ms_umod_specificity
,
ms_umod_composition
isSamePeptideStr() :
ms_peptide
isSameSummedModsStr() :
ms_peptide
isSameVarModsStr() :
ms_peptide
isSaveEveryLastQueryAsc() :
ms_mascotoptions
isSaveLastQueryAsc() :
ms_mascotoptions
isSectionAvailable() :
ms_mascotoptions
,
ms_parseoptions
,
ms_databases
,
ms_libraryoptions
,
ms_processoroptions
,
ms_taxonomyrules
,
ms_unigeneoptions
,
ms_wwwoptions
,
ms_clusterparams
,
ms_cronoptions
isSecurityEnabled() :
ms_security_options
,
ms_session
isSemiSpecific() :
ms_enzyme
isSeriesUsed() :
ms_fragmentationrules
isSet() :
ms_ms1quant_match_ratio
isShowAllFromErrorTolerant() :
ms_mascotoptions
isShowSubsets() :
ms_mascotoptions
isSignificant() :
ms_protein_quant_ratio
isSimilarProtein() :
ms_protein
isSimpleRatio() :
ms_quant_integration
isSinglyCharged() :
ms_fragmentationrules
isSpeciesDescendantOf() :
ms_taxonomytree
isSQ() :
ms_mascotresfile
isStarted() :
ms_http_helper_progress
isStoreModPermutations() :
ms_mascotoptions
isSubstitution() :
ms_modification
isSuspectAssignment() :
ms_spectral_lib_peak
isTaskExists() :
ms_security_tasks
,
ms_security
isThreadedLogicalProcessor() :
ms_processors
isTimedOut() :
ms_session
isTotalIntensity() :
ms_quant_quality
isUnigene() :
ms_protein
isUniquePepseq() :
ms_quant_quality
isUnixDirPermDefined() :
ms_mascotoptions
isUsedForAverage() :
ms_ms1quant_match_ratio
isUseHTTPProxyForFTP() :
ms_connection_settings
,
ms_mascotoptions
isUseHTTPProxyForHTTPS() :
ms_connection_settings
,
ms_mascotoptions
isUsePeptideSummary() :
ms_mascotresults_params
isUseProcessesNotThreads() :
ms_processors
isUserExists() :
ms_security
isUserInGroup() :
ms_group
isValid() :
ms_errors
,
ms_fragmentationrules
,
ms_errs
,
ms_ms1quant_match_ratio
,
ms_enzyme
,
ms_spectral_lib_peak
isZero() :
ms_matrix
Copyright © 2022
Matrix Science Ltd.
All Rights Reserved. Generated on Thu Mar 31 2022 01:12:30