- b -

• BUGFIX_NUM : ms_peptidesummary

- c -

• CACHE_STATUS : ms_peptidesummary
• ChangePasswordResultCode : ms_http_client
• chargeType : ms_ms1quant_match
• CMD_ARGUMENT_PARSE_RESULT : ms_fileutilities
• compareXMLFiles_flags : ms_fileutilities
• cuttertype : ms_enzyme

- d -

• DB_MATCH_TYPE : ms_mascotresults
• DECOY_ALGORITHM : ms_mascotoptions
• DECOY_STATS_COUNT_TYPE : ms_mascotresults
• DISTINCT_PEPTIDE_FLAGS : ms_protein
• DownloadOption : ms_http_client_search
• DUPLICATE : ms_protein

- e -

• eGrouping : ms_distiller_data_search
• err : ms_mascotresfile
• err_sar : ms_fileutilities
• ErrorTypeCode : ms_http_helper_return
• eScoring : ms_distiller_data_search
• eSpectralLibrary : ms_distiller_data_search
• EXEC_AFTER_SEARCH : ms_mascotoptions

- f -

• FileMode : ms_http_helper
• FIND_COMPARE_FLAGS : ms_mascotresults
• FIND_FLAGS : ms_mascotresults
• FLAGS : ms_mascotresults , ms_mascotresfile
• FRAG_NL : ms_aahelper
• FRAG_SERIES_TYPE : ms_fragmentationrules

- g -

• GROUP : ms_protein

- h -

• HOMOLOGY_THRESHOLD_SOURCE : ms_mascotresults
• HTTP_PROTOCOL : ms_connection_settings
• HYPERTHREADING : ms_processors

- i -

• INST_FLAGS : ms_datfile
• IONS_HISTOGRAM : ms_mascotresults

- k -

• KA_TASK : ms_mascotresfile

- l -

• LABEL_FORMAT : ms_fragment
• Level_e : ms_loggingmonitor
• LoginResultCode : ms_http_client
• LogOutputColumns_e : ms_logger

- m -

• MASS_FLAGS : ms_protein
• MATCH_PEAKS : ms_fragmentvector
• MERGE_QUANT_RESULTS_FLAGS : ms_ms1quantitation
• METHOD_COMPATIBLE : ms_quant_method
• MODFILE_FLAGS : ms_umod_configfile
• MS1QUANT_BUGFIX_NUM : ms_ms1quantitation
• MS_REVIEW_COL : ms_mascotoptions
• msg_sev : ms_log
• MSPEPSUM : ms_peptidesummary
• MULTI_SITE_MODS : ms_searchparams

- n -

• NUMERICAL_VALUE_STORAGE : ms_mascotoptions

- p -

• paramType : ms_security_task
• PEAK_ANNOTATION_LEVEL : ms_spectral_lib_peak_list
• peakState : ms_xic
• PEPTIDE_QUALITY : ms_quant_helper
• PEPTIDE_QUANTIFIABILITY : ms_quant_helper
• peptideStatus : ms_ms1quant_peptide_status
• PERC_EXE_RT : ms_mascotoptions
• PERCOLATOR_FILE_NAMES : ms_mascotresfile
• PROXY_TYPE : ms_connection_settings
• PSM : ms_peptide

- q -

• QL_FLAG : ms_peptidesummary
• QUANT_COMPONENT_STATUS : ms_mascotresults

- r -

• ratioStatusCode : ms_ms1quant_match_ratio
• REDIRECT_POLICY : ms_connection_settings
• ReportTopSpecialValues : ms_http_client_search

- s -

• SearchStatusCode : ms_http_client_search
• section : ms_mascotresfile
• SEQDB_INSTALL : ms_datfile
• SequenceShowOptions : ms_http_client_session
• sortBy : ms_mascotresults
• Source_e : ms_loggingmonitor
• STATUS : ms_progress_info
• systemids : ms_group , ms_user

- t -

• TASKID : ms_security_tasks
• TAX_CHOP_TYPES : ms_parserule_plus
• THRESHOLD_TYPE : ms_mascotresults
• TREE_CLUSTER_DISTANCE : ms_treecluster
• TREE_CLUSTER_METHOD : ms_mascotresults

- u -

• UNIQUE_PEP_RULES : ms_mascotresults
• UploadResponseCode : ms_http_client_search
• USERID_SORTBY : ms_security
• usertype : ms_user

- w -

• WHAT_TO_ANNOTATE : ms_spectral_lib_entry
• WST : ms_datfile

- x -

• XML_SCHEMA : ms_mascotresfile