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New features in Mascot 2.3
Protein Family Report
The Protein Family Summary
displays search results a page at a time,
allowing the results of even the largest searches to be browsed without
client-side memory or browser limitations. Proteins are grouped into
familes using hierarchical clustering, making protein inference more
intuitive and more accurate.
Percolator Support
Percolator is a utility from the University of Washington that uses
machine learning to re-rank the peptide matches. The goal is to
maximise sensitivity for a given false discovery rate.
Search Multiple Databases
Multi-select more than one database for a search. This is useful when
you want to search a single organism database and include the sequences
of common contaminants, such as BSA and trypsin.
Other important changes
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