Mascot: The trusted reference standard for protein identification by mass spectrometry for 25 years

ASMS Breakfast Meeting Presentations 2025

We held a breakfast meeting in connection with the 73rd ASMS Conference on Mass Spectrometry and Allied Topics in Baltimore, MD.

If you were unable to attend, or want to review any of the material that was presented, the following PDF files include the slides and the speaker notes.

Adobe Acrobat pdf Using MS2Rescore to boost identification rates in complex samples,
Tim Van Den Bossche, Computational Omics and Systems Biology Group (CompOmics), Ghent University/VIB-UGent Center for Medical Biotechnology
Adobe Acrobat pdf Mascot DIA: Universal spectrum-centric approach (0.5 MB)
Adobe Acrobat pdf Mascot DIA: Thermo LFQ example (1.3 MB)

Poster presentations

Matrix Science presented two posters at ASMS 2025. PDF copies of the posters can be downloaded below.

Adobe Acrobat pdf TP 505: Customizable machine learning adapter improves LFQ in Mascot Distiller (0.2 MB)
Adobe Acrobat pdf ThP 265: Machine learning-enabled Mascot Server API improves LFQ in client software like Thermo Proteome Discoverer (0.2 MB)